alogos.systems.pige._parameters

Default parameters for piGE.

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Detailed object descriptions

alogos.systems.pige._parameters.default_parameters

Default parameters for piGE.

These values can be changed to affect the default behavior of piGE when used in a search algorithm. Note that the default values can also be overwritten by passing parameters to the constructor of a search algorithm.

Parameters:

• genotype_length (int, default=10)

• codon_size (int, default=8)

• max_wraps (int, default=3)

• max_expansions (int, default=1_000_000)

• stack_mode (str, default=”inplace”) – Possible values:

  • "start"

  • "end"

  • "inplace"

• init_ind_operator (str, default=”random_genotype”) – Possible values:

  • "given_genotype"

  • "given_derivation_tree"

  • "given_phenotype"

  • "random_genotype"

  • "random_valid_genotype"

  • "gp_grow_tree"

  • "pi_grow_tree"

  • "gp_full_tree"

  • "ptc2_tree"

• init_ind_given_genotype (Genotype, default=`None`)

• init_ind_given_derivation_tree (DerivationTree, default=`None`)

• init_ind_given_phenotype (str, default=`None`)

• init_ind_random_valid_genotype_max_tries (int, default=1_000)

• init_ind_gp_grow_max_depth (int, default=8)

• init_ind_gp_full_max_depth (int, default=8)

• init_ind_pi_grow_max_depth (int, default=8)

• init_ind_ptc2_max_expansions (int, default=50)

• init_pop_operator (str, default=”random_genotype”) – Possible values:

  • "given_genotypes"

  • "given_derivation_trees"

  • "given_phenotypes"

  • "random_genotypes"

  • "gp_rhh"

  • "pi_rhh"

  • "ptc2"

• init_pop_size (int, default=100) – This parameter is used by population initialization operators. Caution: Search methods like EvolutionaryAlgorithm come with the parameter population_size, which determines the size of the population both during initialization and during the search, therefore overwriting the value of init_pop_size.

• init_pop_given_genotypes (list of Genotype, default=`None`)

• init_pop_given_derivation_trees (list of DerivationTree, default=`None`)

• init_pop_given_phenotypes (list of str, default=`None`)

• init_pop_gp_rhh_start_depth (int, default=2)

• init_pop_gp_rhh_end_depth (int, default=17)

• init_pop_pi_rhh_start_depth (int, default=2)

• init_pop_pi_rhh_end_depth (int, default=17)

• init_pop_ptc2_start_expansions (int, default=20)

• init_pop_ptc2_end_expansions (int, default=240)

• init_pop_unique_genotypes (bool, default=False)

• init_pop_unique_phenotypes (bool, default=True)

• init_pop_unique_max_tries (int, default=100000)

• mutation_operator (str, default=”int_replacement_by_probability”) – Possible values:

  • "int_replacement_by_probability"

  • "int_replacement_by_count"

• mutation_int_replacement_probability (float, default=0.01)

• mutation_int_replacement_count (int, default=1)

• crossover_operator (str, default=”two_point_length_preserving”) – Possible values:

  • "two_point_length_preserving"

• neighborhood_operator (str, default=”int_replacement”) – Possible values:

  • "int_replacement"

• neighborhood_distance (int, default=1)

• neighborhood_max_size (int, default=100)

• neighborhood_only_terminals (bool, default=False)